Sequence Similarity Clusters for the Entities in PDB 1IE3

Entity #1 | Chains: A,B,C,D
MALATE DEHYDROGENASE protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 2970
95 % 7 7 3294 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 7 7 3351
70 % 10 10 1771
50 % 16 20 771
40 % 16 20 804
30 % 183 231 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures