Sequence Similarity Clusters for the Entities in PDB 1IE3

Entity #1 | Chains: A,B,C,D
MALATE DEHYDROGENASE protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 8651
95 % 7 7 3133 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 7 7 3178
70 % 10 10 1672
50 % 16 20 737
40 % 16 20 769
30 % 180 227 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures