Sequence Similarity Clusters for the Entities in PDB 1IDK

Entity #1 | Chains: A
PECTIN LYASE A protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56502
95 % 1 2 27289 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 2 26287
70 % 1 2 23731
50 % 2 3 17513
40 % 2 3 15467
30 % 2 3 12950

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures