Sequence Similarity Clusters for the Entities in PDB 1IDK

Entity #1 | Chains: A
PECTIN LYASE A protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55614
95 % 1 2 26843 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 2 25869
70 % 1 2 23371
50 % 2 3 17258
40 % 2 3 15239
30 % 2 3 12772

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures