Sequence Similarity Clusters for the Entities in PDB 1IDJ

Entity #1 | Chains: A,B
PECTIN LYASE A protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35824
95 % 2 2 22711 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 2 2 22045
70 % 2 2 20223
50 % 3 3 13798
40 % 3 3 12405
30 % 3 3 10725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures