Sequence Similarity Clusters for the Entities in PDB 1IDJ

Entity #1 | Chains: A,B
PECTIN LYASE A protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34622
95 % 2 2 21956 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 2 2 21341
70 % 2 2 19581
50 % 3 3 13358
40 % 3 3 12022
30 % 3 3 10398

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.