Sequence Similarity Clusters for the Entities in PDB 1IDJ

Entity #1 | Chains: A,B
PECTIN LYASE A protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46326
95 % 2 2 26250 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 25326
70 % 2 2 22944
50 % 3 3 16935
40 % 3 3 14961
30 % 3 3 12528

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures