Sequence Similarity Clusters for the Entities in PDB 1IDB

Entity #1 | Chains: A,B
HIV-2 PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 1657
95 % 11 19 1220 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 11 19 1247
70 % 12 26 1038
50 % 549 689 3
40 % 559 699 7
30 % 561 701 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.