Sequence Similarity Clusters for the Entities in PDB 1ICE

Entity #1 | Chains: A
INTERLEUKIN-1 BETA CONVERTING ENZYME protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 7646
95 % 24 32 1903 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 24 32 1949
70 % 24 32 1965
50 % 24 32 1996
40 % 24 32 1979
30 % 24 32 1892
Entity #2 | Chains: T
TETRAPEPTIDE ALDEHYDE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B
INTERLEUKIN-1 BETA CONVERTING ENZYME protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 32 1638
95 % 24 32 1912 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.8
PDBFlex
90 % 24 32 1957
70 % 24 32 1972
50 % 24 32 2003
40 % 24 32 1987
30 % 24 32 1897

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures