Sequence Similarity Clusters for the Entities in PDB 1ICE

Entity #1 | Chains: A
INTERLEUKIN-1 BETA CONVERTING ENZYME protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 7255
95 % 24 32 1805 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 24 32 1846
70 % 24 32 1861
50 % 24 32 1896
40 % 24 32 1885
30 % 24 32 1809
Entity #2 | Chains: T
TETRAPEPTIDE ALDEHYDE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B
INTERLEUKIN-1 BETA CONVERTING ENZYME protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 32 1541
95 % 24 32 1813 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.8
PDBFlex
90 % 24 32 1852
70 % 24 32 1867
50 % 24 32 1903
40 % 24 32 1893
30 % 24 32 1814

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures