Sequence Similarity Clusters for the Entities in PDB 1ICE

Entity #1 | Chains: A
INTERLEUKIN-1 BETA CONVERTING ENZYME protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 10 7443
95 % 24 32 1856 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 24 32 1897
70 % 24 32 1915
50 % 24 32 1951
40 % 24 32 1934
30 % 24 32 1853
Entity #2 | Chains: T
TETRAPEPTIDE ALDEHYDE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B
INTERLEUKIN-1 BETA CONVERTING ENZYME protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 24 32 1592
95 % 24 32 1866 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.8
PDBFlex
90 % 24 32 1905
70 % 24 32 1922
50 % 24 32 1958
40 % 24 32 1942
30 % 24 32 1858

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures