Sequence Similarity Clusters for the Entities in PDB 1IC5

Entity #1 | Chains: L
LYSOZYME BINDING IG KAPPA CHAIN protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 14 3782
95 % 16 22 2322
90 % 16 22 2388
70 % 87 191 73
50 % 132 308 22
40 % 387 936 5
30 % 434 1065 7
Entity #2 | Chains: H
IGG1 FAB CHAIN H protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69084
95 % 16 22 2321
90 % 16 22 2387
70 % 19 39 1114
50 % 240 583 7
40 % 388 936 5
30 % 435 1065 7
Entity #3 | Chains: Y
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 548 665 3
95 % 599 718 4
90 % 610 735 5
70 % 817 955 7
50 % 822 963 8
40 % 843 997 11
30 % 843 997 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures