Sequence Similarity Clusters for the Entities in PDB 1IBX

Entity #1 | Chains: A
DNA FRAGMENTATION FACTOR 40 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71236
95 % 1 1 49290
90 % 1 1 46740
70 % 1 1 40970
50 % 1 3 18814
40 % 1 3 16760
30 % 3 5 5926
Entity #2 | Chains: B
CHIMERA OF IGG BINDING PROTEIN G AND DNA FRAGMENTATION FACTOR 45 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65577
95 % 1 1 45325
90 % 1 1 42986
70 % 1 1 37757
50 % 1 1 32138
40 % 1 1 28361
30 % 1 1 24055

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures