Sequence Similarity Clusters for the Entities in PDB 1IBX

Entity #1 | Chains: A
DNA FRAGMENTATION FACTOR 40 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47690
95 % 1 1 39589
90 % 1 1 37734
70 % 1 1 33439
50 % 1 3 17111
40 % 1 3 15134
30 % 1 3 13363
Entity #2 | Chains: B
CHIMERA OF IGG BINDING PROTEIN G AND DNA FRAGMENTATION FACTOR 45 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47689
95 % 1 1 39588
90 % 1 1 37733
70 % 1 1 33438
50 % 1 1 28416
40 % 1 1 24915
30 % 1 1 20758

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures