Sequence Similarity Clusters for the Entities in PDB 1IBW

Entity #1 | Chains: A,C,E
HISTIDINE DECARBOXYLASE BETA CHAIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 5050
95 % 5 6 3580
90 % 5 6 3616
70 % 5 6 3568
50 % 5 6 3487
40 % 5 6 3370
30 % 5 6 3164
Entity #2 | Chains: B,D,F
HISTIDINE DECARBOXYLASE ALPHA CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 2795
95 % 5 6 3510
90 % 5 6 3552
70 % 5 6 3499
50 % 5 6 3421
40 % 5 6 3313
30 % 5 6 3095

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.