Sequence Similarity Clusters for the Entities in PDB 1IBV

Entity #1 | Chains: A,C,E
HISTIDINE DECARBOXYLASE BETA CHAIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 5400
95 % 2 6 3765
90 % 2 6 3806
70 % 2 6 3756
50 % 2 6 3669
40 % 2 6 3532
30 % 2 6 3304
Entity #2 | Chains: B,D,F
HISTIDINE DECARBOXYLASE ALPHA CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 2957
95 % 2 6 3688
90 % 2 6 3737
70 % 2 6 3679
50 % 2 6 3599
40 % 2 6 3470
30 % 2 6 3233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.