Sequence Similarity Clusters for the Entities in PDB 1IBU

Entity #1 | Chains: A,C,E
HISTIDINE DECARBOXYLASE BETA CHAIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 5020
95 % 6 6 3564
90 % 6 6 3603
70 % 6 6 3552
50 % 6 6 3471
40 % 6 6 3355
30 % 6 6 3147
Entity #2 | Chains: B,D,F
HISTIDINE DECARBOXYLASE ALPHA CHAIN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 2772
95 % 6 6 3491
90 % 6 6 3536
70 % 6 6 3479
50 % 6 6 3401
40 % 6 6 3295
30 % 6 6 3076

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.