Sequence Similarity Clusters for the Entities in PDB 1IBT

Entity #1 | Chains: A,C,E
HISTIDINE DECARBOXYLASE BETA CHAIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 5192
95 % 3 6 3662
90 % 3 6 3699
70 % 3 6 3649
50 % 3 6 3567
40 % 3 6 3445
30 % 3 6 3229
Entity #2 | Chains: B,D,F
HISTIDINE DECARBOXYLASE ALPHA CHAIN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 2860
95 % 3 6 3587
90 % 3 6 3633
70 % 3 6 3577
50 % 3 6 3499
40 % 3 6 3384
30 % 3 6 3154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.