Sequence Similarity Clusters for the Entities in PDB 1IBT

Entity #1 | Chains: A,C,E
HISTIDINE DECARBOXYLASE BETA CHAIN protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 5156
95 % 3 6 3632
90 % 3 6 3671
70 % 3 6 3624
50 % 3 6 3544
40 % 3 6 3421
30 % 3 6 3207
Entity #2 | Chains: B,D,F
HISTIDINE DECARBOXYLASE ALPHA CHAIN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 2835
95 % 3 6 3558
90 % 3 6 3605
70 % 3 6 3553
50 % 3 6 3477
40 % 3 6 3361
30 % 3 6 3134

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.