Sequence Similarity Clusters for the Entities in PDB 1IBR

Entity #1 | Chains: A,C
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 51 447
95 % 49 74 289
90 % 50 77 291
70 % 52 80 316
50 % 52 80 368
40 % 53 81 390
30 % 502 742 16
Entity #2 | Chains: B,D
Importin beta-1 subunit protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23827
95 % 1 6 5001
90 % 1 6 5021
70 % 1 6 4963
50 % 1 6 4750
40 % 1 6 4507
30 % 1 6 4111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.