Sequence Similarity Clusters for the Entities in PDB 1IBR

Entity #1 | Chains: A,C
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 27 40 563
95 % 38 63 310
90 % 39 66 319
70 % 41 69 333
50 % 41 69 375
40 % 42 70 395
30 % 484 717 15
Entity #2 | Chains: B,D
Importin beta-1 subunit protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23170
95 % 1 6 4853
90 % 1 6 4876
70 % 1 6 4825
50 % 1 6 4615
40 % 1 6 4393
30 % 1 6 4016

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.