Sequence Similarity Clusters for the Entities in PDB 1IBR

Entity #1 | Chains: A,C
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 51 489
95 % 49 74 309
90 % 51 78 309
70 % 53 81 342
50 % 53 81 400
40 % 54 82 417
30 % 524 772 16
Entity #2 | Chains: B,D
Importin beta-1 subunit protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25054
95 % 1 6 5269
90 % 1 6 5283
70 % 1 6 5234
50 % 1 6 4987
40 % 1 6 4713
30 % 1 6 4304

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.