Sequence Similarity Clusters for the Entities in PDB 1IBG

Entity #1 | Chains: L
IGG2B-KAPPA 40-50 FAB (LIGHT CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56229
95 % 6 9 4101
90 % 38 77 260
70 % 1089 1733 2
50 % 2650 4230 1
40 % 2650 4231 1
30 % 3056 4982 1
Entity #2 | Chains: H
IGG2B-KAPPA 40-50 FAB (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56228
95 % 1 1 39404
90 % 1 1 37623
70 % 1281 2046 1
50 % 2651 4230 1
40 % 2651 4231 1
30 % 3057 4982 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.