Sequence Similarity Clusters for the Entities in PDB 1IBE

Entity #1 | Chains: A
HEMOGLOBIN (DEOXY) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67765
95 % 4 18 2806 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 4 18 2859
70 % 58 332 16
50 % 143 754 4
40 % 144 759 8
30 % 426 1226 8
Entity #2 | Chains: B
HEMOGLOBIN (DEOXY) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 2306
95 % 4 18 2804 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 4 18 2857
70 % 61 346 14
50 % 144 754 4
40 % 145 759 8
30 % 427 1226 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures