Sequence Similarity Clusters for the Entities in PDB 1IBE

Entity #1 | Chains: A
HEMOGLOBIN (DEOXY) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66001
95 % 5 18 2719 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 18 2770
70 % 56 327 15
50 % 139 744 4
40 % 140 749 8
30 % 408 1201 8
Entity #2 | Chains: B
HEMOGLOBIN (DEOXY) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2226
95 % 5 18 2716 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 5 18 2767
70 % 59 341 13
50 % 140 744 4
40 % 141 749 8
30 % 409 1201 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures