Sequence Similarity Clusters for the Entities in PDB 1IBE

Entity #1 | Chains: A
HEMOGLOBIN (DEOXY) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65164
95 % 5 18 2668 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 5 18 2716
70 % 56 326 15
50 % 139 742 4
40 % 140 747 7
30 % 404 1190 8
Entity #2 | Chains: B
HEMOGLOBIN (DEOXY) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 2174
95 % 5 18 2666 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 18 2714
70 % 59 340 13
50 % 140 742 4
40 % 141 747 7
30 % 405 1190 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.