Sequence Similarity Clusters for the Entities in PDB 1IBE

Entity #1 | Chains: A
HEMOGLOBIN (DEOXY) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64192
95 % 4 18 2635 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 4 18 2683
70 % 55 322 17
50 % 137 734 5
40 % 138 739 8
30 % 402 1182 8
Entity #2 | Chains: B
HEMOGLOBIN (DEOXY) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 2144
95 % 4 18 2633 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 4 18 2681
70 % 58 336 13
50 % 138 734 5
40 % 139 739 8
30 % 403 1182 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.