Sequence Similarity Clusters for the Entities in PDB 1IBE

Entity #1 | Chains: A
HEMOGLOBIN (DEOXY) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66905
95 % 4 18 2764 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 4 18 2814
70 % 58 332 15
50 % 143 754 4
40 % 144 759 8
30 % 419 1218 8
Entity #2 | Chains: B
HEMOGLOBIN (DEOXY) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 2276
95 % 4 18 2762 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 4 18 2812
70 % 61 346 12
50 % 144 754 4
40 % 145 759 8
30 % 420 1218 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures