Sequence Similarity Clusters for the Entities in PDB 1IB6

Entity #1 | Chains: A,B,C,D
MALATE DEHYDROGENASE protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 2965
95 % 5 7 3275 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 5 7 3332
70 % 7 10 1750
50 % 10 20 767
40 % 10 20 803
30 % 127 231 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures