Sequence Similarity Clusters for the Entities in PDB 1IB4

Entity #1 | Chains: A,B
POLYGALACTURONASE protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25967
95 % 2 2 21896 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 21277
70 % 2 2 19542
50 % 5 5 3360
40 % 9 9 2693
30 % 10 10 2433

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.