Sequence Similarity Clusters for the Entities in PDB 1IB1

Entity #1 | Chains: A,B,C,D
14-3-3 ZETA ISOFORM protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 37 385
95 % 31 39 485 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 31 39 520
70 % 117 146 150
50 % 118 150 167
40 % 118 150 179
30 % 118 150 191
Entity #2 | Chains: E,F,G,H
SEROTONIN N-ACETYLTRANSFERASE protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10965
95 % 5 5 9702 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 5 5 9591
70 % 5 5 9158
50 % 5 5 8285
40 % 5 5 7608
30 % 5 5 6701

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures