Sequence Similarity Clusters for the Entities in PDB 1IB1

Entity #1 | Chains: A,B,C,D
14-3-3 ZETA ISOFORM protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 38 399
95 % 31 39 496 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 31 39 531
70 % 125 158 134
50 % 126 162 151
40 % 126 162 165
30 % 127 163 175
Entity #2 | Chains: E,F,G,H
SEROTONIN N-ACETYLTRANSFERASE protein, length: 200 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 9897
95 % 5 5 9704 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 5 9577
70 % 5 5 9136
50 % 5 5 8327
40 % 5 5 7604
30 % 5 5 6596

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures