Sequence Similarity Clusters for the Entities in PDB 1IAU

Entity #1 | Chains: A
GRANZYME B protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58312
95 % 1 2 22391 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 2 21729
70 % 1 7 3094
50 % 20 34 1001
40 % 1260 1682 4
30 % 1356 1831 6
Entity #2 | Chains: B
acetyl-isoleucyl-glutamyl-prolyl-aspartyl-aldehyde peptide INHIBITOR protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.