Sequence Similarity Clusters for the Entities in PDB 1IAR

Entity #1 | Chains: A
PROTEIN (INTERLEUKIN-4) protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 13 4135
95 % 10 24 2374 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.0
PDBFlex
90 % 10 25 2267
70 % 10 25 2259
50 % 10 25 2236
40 % 10 25 2225
30 % 10 25 2125
Entity #2 | Chains: B
PROTEIN (INTERLEUKIN-4 RECEPTOR ALPHA CHAIN) protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61576
95 % 1 5 14529 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 1 5 14263
70 % 1 5 13388
50 % 1 5 11903
40 % 1 5 10783
30 % 1 5 9374

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures