Sequence Similarity Clusters for the Entities in PDB 1IAJ

Entity #1 | Chains: A,B
TRANSIENT RECEPTOR POTENTIAL-RELATED PROTEIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12241
95 % 3 3 11891 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 3 3 11733
70 % 3 3 11101
50 % 3 3 9947
40 % 3 3 9048
30 % 3 3 7905

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.