Sequence Similarity Clusters for the Entities in PDB 1IAJ

Entity #1 | Chains: A,B
TRANSIENT RECEPTOR POTENTIAL-RELATED PROTEIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12020
95 % 3 3 11586 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 3 3 11427
70 % 3 3 10789
50 % 3 3 9704
40 % 3 3 8790
30 % 3 3 7586

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures