Sequence Similarity Clusters for the Entities in PDB 1IAI

Entity #1 | Chains: L
IDIOTYPIC FAB 730.1.4 (IGG1) OF VIRUS NEUTRALIZING ANTIBODY protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57723
95 % 7 14 3378
90 % 43 66 413
70 % 1275 1773 2
50 % 3112 4363 1
40 % 3112 4363 1
30 % 3649 5147 1
Entity #2 | Chains: H
IDIOTYPIC FAB 730.1.4 (IGG1) OF VIRUS NEUTRALIZING ANTIBODY protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57160
95 % 1 1 40105
90 % 12 12 4495
70 % 1501 2109 1
50 % 3113 4363 1
40 % 3113 4363 1
30 % 3650 5147 1
Entity #3 | Chains: M
ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26231
95 % 1 3 17449
90 % 67 144 139
70 % 1276 1773 2
50 % 3114 4363 1
40 % 3114 4363 1
30 % 3651 5147 1
Entity #4 | Chains: I
ANTI-IDIOTYPIC FAB 409.5.3 (IGG2A) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26155
95 % 1 2 21799
90 % 1 2 21147
70 % 1502 2109 1
50 % 3115 4363 1
40 % 3115 4363 1
30 % 3652 5147 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.