Sequence Similarity Clusters for the Entities in PDB 1IA9

Entity #1 | Chains: A,B
TRANSIENT RECEPTOR POTENTIAL-RELATED PROTEIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12559
95 % 1 3 12164 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 3 11995
70 % 1 3 11341
50 % 1 3 10165
40 % 1 3 9239
30 % 1 3 8080

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures