Sequence Similarity Clusters for the Entities in PDB 1IA0

Entity #1 | Chains: A
TUBULIN ALPHA CHAIN protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 11731
95 % 172 173 75
90 % 173 174 80
70 % 181 182 91
50 % 181 182 121
40 % 359 362 29
30 % 369 372 43
Entity #2 | Chains: B
TUBULIN BETA CHAIN protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 76 77 183
95 % 168 169 77
90 % 173 174 77
70 % 179 180 90
50 % 179 180 120
40 % 360 362 29
30 % 370 372 43
Entity #3 | Chains: K
KINESIN-LIKE PROTEIN KIF1A protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26381
95 % 18 18 3547
90 % 18 18 3600
70 % 18 18 3554
50 % 19 19 2955
40 % 136 136 218
30 % 152 152 212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures