Sequence Similarity Clusters for the Entities in PDB 1IA0

Entity #1 | Chains: A
TUBULIN ALPHA CHAIN protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 55 56 377
95 % 190 191 67
90 % 191 192 72
70 % 199 200 82
50 % 199 200 113
40 % 395 398 26
30 % 405 408 41
Entity #2 | Chains: B
TUBULIN BETA CHAIN protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 164 164 88
95 % 186 187 69
90 % 191 192 69
70 % 197 198 80
50 % 197 198 111
40 % 396 398 26
30 % 406 408 41
Entity #3 | Chains: K
KINESIN-LIKE PROTEIN KIF1A protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 28366
95 % 18 18 3650
90 % 18 18 3722
70 % 18 18 3650
50 % 21 21 2359
40 % 139 139 226
30 % 159 159 223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures