Sequence Similarity Clusters for the Entities in PDB 1IA0

Entity #1 | Chains: A
TUBULIN ALPHA CHAIN protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 11910
95 % 180 181 71
90 % 181 182 74
70 % 189 190 88
50 % 189 190 117
40 % 375 378 25
30 % 385 388 43
Entity #2 | Chains: B
TUBULIN BETA CHAIN protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 76 77 183
95 % 176 177 72
90 % 181 182 71
70 % 187 188 87
50 % 187 188 116
40 % 376 378 25
30 % 386 388 43
Entity #3 | Chains: K
KINESIN-LIKE PROTEIN KIF1A protein, length: 394 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26737
95 % 18 18 3582
90 % 18 18 3645
70 % 18 18 3596
50 % 19 19 2986
40 % 136 136 223
30 % 152 152 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures