Sequence Similarity Clusters for the Entities in PDB 1I9J

Entity #1 | Chains: L
RECOMBINANT MONOCLONAL ANTI-TESTOSTERONE FAB FRAGMENT LIGHT CHAIN protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38868
95 % 90 143 147 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 98 153 149
70 % 900 1822 2
50 % 2230 4489 1
40 % 2230 4489 1
30 % 2548 5290 1
Entity #2 | Chains: H
RECOMBINANT MONOCLONAL ANTI-TESTOSTERONE FAB FRAGMENT HEAVY CHAIN protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 38777
95 % 3 4 17618 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 3 4 17236
70 % 1083 2172 1
50 % 2231 4489 1
40 % 2231 4489 1
30 % 2549 5290 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.