Sequence Similarity Clusters for the Entities in PDB 1I97

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 229 267 37
95 % 230 268 51
90 % 230 268 54
70 % 230 268 65
50 % 277 394 25
40 % 277 394 37
30 % 307 490 29
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 269 35
95 % 230 269 47
90 % 230 269 50
70 % 230 269 60
50 % 271 388 34
40 % 303 487 18
30 % 303 487 31
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 171 217 48
95 % 230 276 36
90 % 230 276 40
70 % 271 401 20
50 % 271 403 23
40 % 271 403 34
30 % 271 403 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 270 33
95 % 230 270 44
90 % 230 270 48
70 % 230 270 57
50 % 274 393 32
40 % 274 393 44
30 % 304 491 32
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 268 36
95 % 230 268 52
90 % 230 268 55
70 % 230 270 58
50 % 230 270 87
40 % 230 270 108
30 % 230 270 120
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 272 28
95 % 235 277 35
90 % 235 277 39
70 % 235 277 50
50 % 279 401 24
40 % 279 404 33
30 % 279 404 54
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 264 38
95 % 230 269 49
90 % 230 269 52
70 % 230 269 62
50 % 230 271 86
40 % 230 271 106
30 % 274 389 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22060
95 % 3 4 18864
90 % 229 267 56
70 % 229 267 66
50 % 229 267 90
40 % 229 267 111
30 % 229 267 123
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 51 647
95 % 205 234 62
90 % 205 234 66
70 % 205 234 77
50 % 205 234 103
40 % 205 234 129
30 % 205 234 140
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 272 27
95 % 232 272 40
90 % 232 272 45
70 % 232 272 54
50 % 273 393 28
40 % 273 393 39
30 % 273 393 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 269 31
95 % 230 270 41
90 % 230 270 46
70 % 230 270 55
50 % 271 387 33
40 % 271 390 42
30 % 271 390 61
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 194 217 49
95 % 230 268 50
90 % 230 268 53
70 % 230 268 64
50 % 230 268 89
40 % 230 268 110
30 % 230 268 122
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 227 259 41
95 % 227 259 56
90 % 227 259 59
70 % 227 259 69
50 % 227 259 94
40 % 227 259 116
30 % 227 259 129
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 204 233 45
95 % 204 233 63
90 % 204 233 67
70 % 204 233 78
50 % 223 301 78
40 % 223 301 96
30 % 223 301 113
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 228 262 39
95 % 231 270 42
90 % 231 270 47
70 % 231 270 56
50 % 272 389 31
40 % 272 392 40
30 % 272 392 60
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 231 269 34
95 % 231 269 46
90 % 231 269 49
70 % 231 269 59
50 % 273 393 29
40 % 273 393 41
30 % 273 395 57
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 233 274 24
95 % 239 280 33
90 % 239 280 38
70 % 239 280 49
50 % 239 280 83
40 % 239 280 102
30 % 263 334 87
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 273 26
95 % 232 274 37
90 % 232 274 41
70 % 232 274 51
50 % 260 336 65
40 % 260 339 75
30 % 260 339 89
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21250
95 % 3 4 18287
90 % 232 273 42
70 % 232 273 52
50 % 275 394 26
40 % 276 398 36
30 % 308 500 28
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 72 91 202
95 % 230 269 48
90 % 230 269 51
70 % 230 269 61
50 % 271 388 35
40 % 271 388 45
30 % 301 488 33

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.