Sequence Similarity Clusters for the Entities in PDB 1I97

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 224 253 35
95 % 225 254 48
90 % 225 254 53
70 % 225 254 63
50 % 269 356 28
40 % 269 356 38
30 % 293 429 35
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 225 255 33
95 % 225 255 43
90 % 225 255 48
70 % 225 255 57
50 % 263 350 35
40 % 289 430 21
30 % 289 431 34
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 170 207 46
95 % 225 262 35
90 % 225 262 40
70 % 263 361 23
50 % 263 362 27
40 % 263 362 37
30 % 263 362 56
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 225 256 31
95 % 225 256 41
90 % 225 256 46
70 % 225 256 55
50 % 266 355 32
40 % 266 355 43
30 % 290 430 38
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 225 254 34
95 % 225 254 49
90 % 225 254 54
70 % 225 255 60
50 % 225 255 86
40 % 225 255 107
30 % 225 255 119
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 225 258 27
95 % 230 263 34
90 % 230 263 39
70 % 230 263 48
50 % 271 363 26
40 % 271 364 36
30 % 271 364 55
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 225 250 36
95 % 225 255 45
90 % 225 255 50
70 % 225 255 59
50 % 225 255 85
40 % 225 256 106
30 % 266 353 61
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21015
95 % 3 4 18021
90 % 224 253 55
70 % 224 253 64
50 % 224 253 88
40 % 224 253 109
30 % 224 253 122
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 51 608
95 % 200 220 63
90 % 200 220 68
70 % 200 220 78
50 % 200 220 108
40 % 200 220 131
30 % 200 220 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 227 258 26
95 % 227 258 37
90 % 227 258 43
70 % 227 258 52
50 % 265 353 31
40 % 265 353 41
30 % 265 353 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 225 255 28
95 % 225 256 38
90 % 225 256 44
70 % 225 256 53
50 % 263 349 34
40 % 263 350 44
30 % 263 350 60
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 189 203 47
95 % 225 254 47
90 % 225 254 52
70 % 225 254 62
50 % 225 254 87
40 % 225 254 108
30 % 225 254 120
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 222 245 38
95 % 222 245 53
90 % 222 245 57
70 % 222 245 68
50 % 222 245 93
40 % 222 245 117
30 % 222 245 131
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 199 219 44
95 % 199 219 64
90 % 199 219 69
70 % 199 219 79
50 % 218 273 78
40 % 218 273 99
30 % 218 273 112
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 223 248 37
95 % 226 256 39
90 % 226 256 45
70 % 226 256 54
50 % 264 350 33
40 % 264 351 42
30 % 264 351 59
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 226 255 32
95 % 226 255 42
90 % 226 255 47
70 % 226 255 56
50 % 265 354 30
40 % 265 354 40
30 % 265 356 57
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 228 260 24
95 % 234 266 33
90 % 234 266 36
70 % 234 266 45
50 % 234 266 83
40 % 234 266 101
30 % 255 309 77
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 227 259 25
95 % 227 260 36
90 % 227 260 41
70 % 227 260 50
50 % 252 309 53
40 % 252 310 66
30 % 252 310 86
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 20233
95 % 3 4 17467
90 % 227 259 42
70 % 227 259 51
50 % 267 356 29
40 % 268 358 39
30 % 293 434 32
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 72 91 196
95 % 225 255 44
90 % 225 255 49
70 % 225 255 58
50 % 263 350 36
40 % 263 350 45
30 % 287 425 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.