Sequence Similarity Clusters for the Entities in PDB 1I97

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 229 267 38
95 % 230 268 54
90 % 230 268 57
70 % 230 268 69
50 % 278 399 26
40 % 278 399 37
30 % 309 498 32
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 269 36
95 % 230 269 50
90 % 230 269 53
70 % 230 269 64
50 % 271 392 35
40 % 304 497 19
30 % 304 497 33
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 171 217 50
95 % 230 276 40
90 % 230 276 44
70 % 271 405 22
50 % 271 410 25
40 % 271 410 35
30 % 271 410 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 270 34
95 % 230 270 47
90 % 230 270 51
70 % 230 270 61
50 % 274 397 33
40 % 274 397 46
30 % 305 498 36
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 268 37
95 % 230 268 55
90 % 230 268 58
70 % 230 270 62
50 % 230 270 90
40 % 230 270 112
30 % 230 270 123
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 272 30
95 % 235 277 39
90 % 235 277 43
70 % 235 277 55
50 % 279 405 27
40 % 279 408 36
30 % 279 408 56
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 264 39
95 % 230 269 52
90 % 230 269 55
70 % 230 269 66
50 % 230 271 89
40 % 230 271 110
30 % 274 393 64
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 22540
95 % 3 4 19261
90 % 229 267 59
70 % 229 267 70
50 % 229 267 94
40 % 229 267 115
30 % 229 267 127
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 36 51 692
95 % 205 234 64
90 % 205 234 68
70 % 205 234 80
50 % 205 234 108
40 % 205 234 133
30 % 205 234 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 272 29
95 % 232 272 43
90 % 232 272 48
70 % 232 272 58
50 % 273 397 30
40 % 273 400 41
30 % 273 400 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 269 32
95 % 230 270 44
90 % 230 270 49
70 % 230 270 59
50 % 271 391 34
40 % 271 394 45
30 % 271 394 62
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 194 217 51
95 % 230 268 53
90 % 230 268 56
70 % 230 268 68
50 % 230 268 92
40 % 230 268 113
30 % 230 268 124
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 227 259 43
95 % 227 259 59
90 % 227 259 63
70 % 227 259 75
50 % 227 259 97
40 % 227 259 120
30 % 227 259 130
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 204 233 47
95 % 204 233 65
90 % 204 233 69
70 % 204 233 81
50 % 223 305 84
40 % 223 305 102
30 % 223 305 113
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 228 262 40
95 % 231 270 45
90 % 231 270 50
70 % 231 270 60
50 % 272 393 32
40 % 272 396 43
30 % 272 396 61
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 231 269 35
95 % 231 269 49
90 % 231 269 52
70 % 231 269 63
50 % 273 397 31
40 % 273 397 44
30 % 273 399 59
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 233 274 27
95 % 239 280 36
90 % 239 280 41
70 % 239 280 52
50 % 239 280 87
40 % 239 280 106
30 % 263 334 90
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 273 28
95 % 232 274 41
90 % 232 274 45
70 % 232 274 56
50 % 260 338 71
40 % 260 341 79
30 % 260 341 93
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 21718
95 % 3 4 18678
90 % 232 273 46
70 % 232 273 57
50 % 275 398 29
40 % 276 402 38
30 % 309 510 30
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 72 91 211
95 % 230 269 51
90 % 230 269 54
70 % 230 269 65
50 % 271 392 36
40 % 271 392 47
30 % 302 497 35

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.