Sequence Similarity Clusters for the Entities in PDB 1I96

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 254 36
95 % 209 255 49
90 % 209 255 54
70 % 209 255 64
50 % 248 362 28
40 % 248 362 38
30 % 273 436 36
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 256 34
95 % 209 256 45
90 % 209 256 50
70 % 209 256 59
50 % 242 356 35
40 % 269 438 20
30 % 269 439 34
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 155 208 46
95 % 209 263 36
90 % 209 263 41
70 % 242 367 22
50 % 242 368 27
40 % 242 368 37
30 % 242 368 57
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 257 32
95 % 209 257 43
90 % 209 257 48
70 % 209 257 57
50 % 245 361 32
40 % 245 361 43
30 % 270 437 39
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 255 35
95 % 209 255 50
90 % 209 255 55
70 % 209 256 62
50 % 209 256 88
40 % 209 256 108
30 % 209 256 120
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 259 29
95 % 213 264 35
90 % 213 264 40
70 % 213 264 50
50 % 249 369 26
40 % 249 370 36
30 % 249 370 56
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 251 37
95 % 209 256 47
90 % 209 256 52
70 % 209 256 61
50 % 209 256 87
40 % 209 257 107
30 % 245 359 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 21375
95 % 2 4 18301
90 % 209 254 56
70 % 209 254 66
50 % 209 254 90
40 % 209 254 111
30 % 209 254 123
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 51 616
95 % 187 221 64
90 % 187 221 69
70 % 187 221 79
50 % 187 221 111
40 % 187 221 132
30 % 187 221 143
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 210 259 27
95 % 210 259 38
90 % 210 259 44
70 % 210 259 53
50 % 243 359 31
40 % 243 359 41
30 % 243 359 59
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 256 30
95 % 209 257 39
90 % 209 257 45
70 % 209 257 54
50 % 242 355 34
40 % 242 356 44
30 % 242 356 62
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 181 204 48
95 % 209 255 48
90 % 209 255 53
70 % 209 255 63
50 % 209 255 89
40 % 209 255 110
30 % 209 255 122
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 246 39
95 % 209 246 54
90 % 209 246 59
70 % 209 246 69
50 % 209 246 95
40 % 209 246 118
30 % 209 246 131
Entity #22 | Chains: V
TRANSLATION INITIATION FACTOR IF3 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64126
95 % 1 1 44324
90 % 1 1 42202
70 % 1 1 37283
50 % 1 1 31944
40 % 1 1 28178
30 % 1 1 23764
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 187 220 45
95 % 187 220 65
90 % 187 220 70
70 % 187 220 80
50 % 198 276 78
40 % 198 276 100
30 % 198 276 112
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 249 38
95 % 209 257 40
90 % 209 257 46
70 % 209 257 55
50 % 242 356 33
40 % 242 357 42
30 % 242 357 61
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 256 33
95 % 209 256 44
90 % 209 256 49
70 % 209 256 58
50 % 243 360 30
40 % 243 360 40
30 % 243 362 58
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 211 261 25
95 % 217 267 34
90 % 217 267 37
70 % 217 267 46
50 % 217 267 84
40 % 217 267 103
30 % 241 313 77
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 210 260 26
95 % 210 261 37
90 % 210 261 42
70 % 210 261 51
50 % 238 313 54
40 % 238 314 68
30 % 238 314 89
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20592
95 % 2 4 17745
90 % 210 260 43
70 % 210 260 52
50 % 245 362 29
40 % 246 364 39
30 % 273 443 33
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 91 198
95 % 209 256 46
90 % 209 256 51
70 % 209 256 60
50 % 242 356 36
40 % 242 356 46
30 % 267 433 40

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.