Sequence Similarity Clusters for the Entities in PDB 1I96

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 206 252 35
95 % 207 253 48
90 % 207 253 53
70 % 207 253 63
50 % 239 348 28
40 % 239 348 38
30 % 263 420 36
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 254 33
95 % 207 254 44
90 % 207 254 49
70 % 207 254 58
50 % 233 342 36
40 % 259 421 22
30 % 259 422 35
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 153 206 45
95 % 207 261 35
90 % 207 261 39
70 % 233 353 23
50 % 233 354 27
40 % 233 354 37
30 % 233 354 56
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 255 30
95 % 207 255 41
90 % 207 255 46
70 % 207 255 55
50 % 236 347 33
40 % 236 347 45
30 % 260 421 41
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 253 34
95 % 207 253 49
90 % 207 253 54
70 % 207 254 61
50 % 207 254 86
40 % 207 254 106
30 % 207 254 119
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 257 27
95 % 211 262 34
90 % 211 262 38
70 % 211 262 49
50 % 240 355 26
40 % 240 356 36
30 % 240 356 55
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 249 36
95 % 207 254 46
90 % 207 254 51
70 % 207 254 60
50 % 207 254 85
40 % 207 255 105
30 % 236 345 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20861
95 % 2 4 17909
90 % 207 252 55
70 % 207 252 64
50 % 207 252 88
40 % 207 252 108
30 % 207 252 121
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 51 598
95 % 185 219 63
90 % 185 219 68
70 % 185 219 78
50 % 185 219 108
40 % 185 219 129
30 % 185 219 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 257 26
95 % 208 257 37
90 % 208 257 43
70 % 208 257 52
50 % 234 345 31
40 % 234 345 42
30 % 234 345 60
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 254 28
95 % 207 255 38
90 % 207 255 44
70 % 207 255 53
50 % 233 341 35
40 % 233 342 47
30 % 233 342 62
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 179 202 47
95 % 207 253 47
90 % 207 253 52
70 % 207 253 62
50 % 207 253 87
40 % 207 253 107
30 % 207 253 120
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 244 38
95 % 207 244 54
90 % 207 244 57
70 % 207 244 68
50 % 207 244 92
40 % 207 244 114
30 % 207 244 128
Entity #22 | Chains: V
TRANSLATION INITIATION FACTOR IF3 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62691
95 % 1 1 43364
90 % 1 1 41304
70 % 1 1 36538
50 % 1 1 31342
40 % 1 1 27675
30 % 1 1 23334
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 218 44
95 % 185 218 64
90 % 185 218 69
70 % 185 218 79
50 % 196 269 79
40 % 196 269 97
30 % 196 269 112
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 205 247 37
95 % 207 255 39
90 % 207 255 45
70 % 207 255 54
50 % 233 342 34
40 % 233 343 44
30 % 233 343 61
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 254 32
95 % 207 254 43
90 % 207 254 48
70 % 207 254 57
50 % 234 346 30
40 % 234 346 41
30 % 234 348 57
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 259 24
95 % 215 265 33
90 % 215 265 36
70 % 215 265 44
50 % 215 265 82
40 % 215 265 100
30 % 232 304 78
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 258 25
95 % 208 259 36
90 % 208 259 41
70 % 208 259 50
50 % 229 304 51
40 % 229 305 63
30 % 229 305 87
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20083
95 % 2 4 17357
90 % 208 258 42
70 % 208 258 51
50 % 236 348 29
40 % 237 350 39
30 % 262 425 33
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 91 192
95 % 207 254 45
90 % 207 254 50
70 % 207 254 59
50 % 233 342 37
40 % 233 342 48
30 % 257 416 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.