Sequence Similarity Clusters for the Entities in PDB 1I96

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 212 267 37
95 % 213 268 50
90 % 213 268 53
70 % 213 268 64
50 % 252 394 25
40 % 252 394 36
30 % 281 487 29
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 269 35
95 % 213 269 46
90 % 213 269 49
70 % 213 269 59
50 % 246 388 34
40 % 277 484 18
30 % 277 484 31
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 155 217 47
95 % 213 276 35
90 % 213 276 39
70 % 246 401 20
50 % 246 403 23
40 % 246 403 34
30 % 246 403 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 270 33
95 % 213 270 43
90 % 213 270 47
70 % 213 270 56
50 % 249 393 32
40 % 249 393 44
30 % 278 488 32
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 268 36
95 % 213 268 51
90 % 213 268 54
70 % 213 270 57
50 % 213 270 87
40 % 213 270 108
30 % 213 270 118
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 272 28
95 % 217 277 34
90 % 217 277 38
70 % 217 277 49
50 % 253 401 24
40 % 253 404 33
30 % 253 404 54
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 264 38
95 % 213 269 48
90 % 213 269 51
70 % 213 269 61
50 % 213 271 86
40 % 213 271 106
30 % 249 389 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 22004
95 % 2 4 18820
90 % 213 267 55
70 % 213 267 65
50 % 213 267 90
40 % 213 267 111
30 % 213 267 122
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 51 645
95 % 191 234 62
90 % 191 234 66
70 % 191 234 77
50 % 191 234 103
40 % 191 234 129
30 % 191 234 140
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 214 272 27
95 % 214 272 39
90 % 214 272 44
70 % 214 272 53
50 % 247 393 28
40 % 247 393 39
30 % 247 393 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 269 31
95 % 213 270 40
90 % 213 270 45
70 % 213 270 54
50 % 246 387 33
40 % 246 390 42
30 % 246 390 61
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 217 48
95 % 213 268 49
90 % 213 268 52
70 % 213 268 63
50 % 213 268 89
40 % 213 268 110
30 % 213 268 120
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 259 41
95 % 213 259 55
90 % 213 259 58
70 % 213 259 68
50 % 213 259 93
40 % 213 259 116
30 % 213 259 129
Entity #22 | Chains: V
TRANSLATION INITIATION FACTOR IF3 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65727
95 % 1 1 45385
90 % 1 1 43167
70 % 1 1 38077
50 % 1 1 32609
40 % 1 1 28758
30 % 1 1 24241
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 191 233 44
95 % 191 233 63
90 % 191 233 67
70 % 191 233 78
50 % 202 301 77
40 % 202 301 95
30 % 202 301 112
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 211 262 39
95 % 213 270 41
90 % 213 270 46
70 % 213 270 55
50 % 246 389 31
40 % 246 392 40
30 % 246 392 60
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 269 34
95 % 213 269 45
90 % 213 269 48
70 % 213 269 58
50 % 247 393 29
40 % 247 393 41
30 % 247 395 57
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 274 24
95 % 221 280 32
90 % 221 280 37
70 % 221 280 48
50 % 221 280 83
40 % 221 280 102
30 % 245 334 87
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 214 273 26
95 % 214 274 36
90 % 214 274 40
70 % 214 274 50
50 % 242 336 64
40 % 242 339 74
30 % 242 339 89
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 21196
95 % 2 4 18243
90 % 214 273 41
70 % 214 273 51
50 % 249 394 26
40 % 250 398 35
30 % 281 497 28
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 91 203
95 % 213 269 47
90 % 213 269 50
70 % 213 269 60
50 % 246 388 35
40 % 246 388 45
30 % 275 485 33

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.