Sequence Similarity Clusters for the Entities in PDB 1I96

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 253 35
95 % 208 254 48
90 % 208 254 53
70 % 208 254 63
50 % 244 356 28
40 % 244 356 38
30 % 268 429 35
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 255 33
95 % 208 255 43
90 % 208 255 48
70 % 208 255 57
50 % 238 350 35
40 % 264 430 21
30 % 264 431 34
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 154 207 46
95 % 208 262 35
90 % 208 262 40
70 % 238 361 23
50 % 238 362 27
40 % 238 362 37
30 % 238 362 56
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 256 31
95 % 208 256 41
90 % 208 256 46
70 % 208 256 55
50 % 241 355 32
40 % 241 355 43
30 % 265 430 38
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 254 34
95 % 208 254 49
90 % 208 254 54
70 % 208 255 60
50 % 208 255 86
40 % 208 255 107
30 % 208 255 119
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 258 27
95 % 212 263 34
90 % 212 263 39
70 % 212 263 48
50 % 245 363 26
40 % 245 364 36
30 % 245 364 55
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 250 36
95 % 208 255 45
90 % 208 255 50
70 % 208 255 59
50 % 208 255 85
40 % 208 256 106
30 % 241 353 61
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 21015
95 % 2 4 18021
90 % 208 253 55
70 % 208 253 64
50 % 208 253 88
40 % 208 253 109
30 % 208 253 122
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 51 608
95 % 186 220 63
90 % 186 220 68
70 % 186 220 78
50 % 186 220 108
40 % 186 220 131
30 % 186 220 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 258 26
95 % 209 258 37
90 % 209 258 43
70 % 209 258 52
50 % 239 353 31
40 % 239 353 41
30 % 239 353 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 255 28
95 % 208 256 38
90 % 208 256 44
70 % 208 256 53
50 % 238 349 34
40 % 238 350 44
30 % 238 350 60
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 180 203 47
95 % 208 254 47
90 % 208 254 52
70 % 208 254 62
50 % 208 254 87
40 % 208 254 108
30 % 208 254 120
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 245 38
95 % 208 245 53
90 % 208 245 57
70 % 208 245 68
50 % 208 245 93
40 % 208 245 117
30 % 208 245 131
Entity #22 | Chains: V
TRANSLATION INITIATION FACTOR IF3 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63156
95 % 1 1 43675
90 % 1 1 41590
70 % 1 1 36754
50 % 1 1 31516
40 % 1 1 27815
30 % 1 1 23464
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 186 219 44
95 % 186 219 64
90 % 186 219 69
70 % 186 219 79
50 % 197 273 78
40 % 197 273 99
30 % 197 273 112
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 206 248 37
95 % 208 256 39
90 % 208 256 45
70 % 208 256 54
50 % 238 350 33
40 % 238 351 42
30 % 238 351 59
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 255 32
95 % 208 255 42
90 % 208 255 47
70 % 208 255 56
50 % 239 354 30
40 % 239 354 40
30 % 239 356 57
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 210 260 24
95 % 216 266 33
90 % 216 266 36
70 % 216 266 45
50 % 216 266 83
40 % 216 266 101
30 % 237 309 77
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 209 259 25
95 % 209 260 36
90 % 209 260 41
70 % 209 260 50
50 % 234 309 53
40 % 234 310 66
30 % 234 310 86
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 20233
95 % 2 4 17467
90 % 209 259 42
70 % 209 259 51
50 % 241 356 29
40 % 242 358 39
30 % 267 434 32
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 91 196
95 % 208 255 44
90 % 208 255 49
70 % 208 255 58
50 % 238 350 36
40 % 238 350 45
30 % 262 425 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.