Sequence Similarity Clusters for the Entities in PDB 1I96

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 214 269 39
95 % 215 270 53
90 % 215 270 58
70 % 215 270 68
50 % 254 421 26
40 % 254 421 38
30 % 286 528 32
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 271 35
95 % 215 271 49
90 % 215 271 54
70 % 215 271 64
50 % 248 415 32
40 % 282 537 19
30 % 282 537 31
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 155 217 51
95 % 215 278 39
90 % 215 278 44
70 % 248 422 19
50 % 248 432 24
40 % 248 432 35
30 % 248 432 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 272 33
95 % 215 272 46
90 % 215 272 51
70 % 215 272 62
50 % 251 419 31
40 % 251 419 43
30 % 283 527 36
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 270 36
95 % 215 270 54
90 % 215 270 59
70 % 215 279 54
50 % 215 279 90
40 % 215 279 113
30 % 215 279 123
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 274 30
95 % 219 279 38
90 % 219 279 43
70 % 219 279 53
50 % 255 428 25
40 % 255 433 34
30 % 255 433 54
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 266 41
95 % 215 271 51
90 % 215 271 56
70 % 215 271 66
50 % 215 278 91
40 % 215 278 114
30 % 251 413 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 23548
95 % 2 4 20139
90 % 215 269 60
70 % 215 269 69
50 % 215 269 94
40 % 215 269 117
30 % 215 269 128
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 51 719
95 % 193 236 65
90 % 193 236 69
70 % 193 236 81
50 % 193 236 111
40 % 193 236 135
30 % 193 236 144
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 216 274 29
95 % 216 274 42
90 % 216 274 48
70 % 216 274 58
50 % 249 421 28
40 % 249 424 40
30 % 249 424 57
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 271 31
95 % 215 272 43
90 % 215 272 49
70 % 215 272 59
50 % 248 409 36
40 % 248 414 45
30 % 248 414 62
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 187 219 50
95 % 215 270 52
90 % 215 270 57
70 % 215 270 67
50 % 215 270 93
40 % 215 270 116
30 % 215 270 127
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 261 43
95 % 215 261 59
90 % 215 261 63
70 % 215 261 74
50 % 215 261 98
40 % 215 261 121
30 % 215 261 133
Entity #22 | Chains: V
TRANSLATION INITIATION FACTOR IF3 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69668
95 % 1 1 48187
90 % 1 1 45732
70 % 1 1 40168
50 % 1 1 34280
40 % 1 1 30215
30 % 1 1 25482
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 235 48
95 % 193 235 66
90 % 193 235 70
70 % 193 235 82
50 % 204 309 84
40 % 204 309 103
30 % 204 309 116
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 213 264 42
95 % 215 272 44
90 % 215 272 50
70 % 215 272 60
50 % 248 416 29
40 % 248 421 41
30 % 248 421 58
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 271 34
95 % 215 271 48
90 % 215 271 53
70 % 215 271 63
50 % 249 417 30
40 % 249 417 42
30 % 249 419 60
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 217 276 27
95 % 223 282 37
90 % 223 282 42
70 % 223 282 51
50 % 223 282 88
40 % 223 282 110
30 % 247 355 95
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 216 275 28
95 % 216 276 41
90 % 216 276 46
70 % 216 276 56
50 % 244 356 66
40 % 244 361 84
30 % 244 361 96
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 22693
95 % 2 4 19525
90 % 216 275 47
70 % 216 275 57
50 % 251 421 27
40 % 252 427 37
30 % 286 542 30
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 91 220
95 % 215 271 50
90 % 215 271 55
70 % 215 271 65
50 % 248 411 35
40 % 248 411 48
30 % 280 526 34

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.