Sequence Similarity Clusters for the Entities in PDB 1I95

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 231 267 40
95 % 232 268 54
90 % 232 268 58
70 % 232 268 69
50 % 281 402 26
40 % 281 402 37
30 % 312 502 32
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 269 37
95 % 232 269 50
90 % 232 269 54
70 % 232 269 64
50 % 274 395 34
40 % 307 501 19
30 % 307 501 33
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 173 217 50
95 % 232 276 40
90 % 232 276 44
70 % 274 406 22
50 % 274 412 25
40 % 274 412 35
30 % 274 412 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 270 35
95 % 232 270 47
90 % 232 270 52
70 % 232 270 62
50 % 277 400 33
40 % 277 400 45
30 % 308 502 36
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 268 38
95 % 232 268 55
90 % 232 268 59
70 % 232 271 61
50 % 232 271 90
40 % 232 271 111
30 % 232 271 124
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 272 30
95 % 237 277 39
90 % 237 277 43
70 % 237 277 55
50 % 282 408 27
40 % 282 411 36
30 % 282 411 56
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 264 41
95 % 232 269 52
90 % 232 269 56
70 % 232 269 66
50 % 232 272 89
40 % 232 272 110
30 % 277 396 64
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 22748
95 % 4 4 19441
90 % 231 267 60
70 % 231 267 70
50 % 231 267 94
40 % 231 267 115
30 % 231 267 127
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 51 692
95 % 206 234 65
90 % 206 234 70
70 % 206 234 81
50 % 206 234 108
40 % 206 234 133
30 % 206 234 142
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 272 29
95 % 234 272 43
90 % 234 272 48
70 % 234 272 58
50 % 276 400 30
40 % 276 403 41
30 % 276 403 58
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 269 33
95 % 232 270 44
90 % 232 270 50
70 % 232 270 59
50 % 274 392 37
40 % 274 395 46
30 % 274 395 62
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 195 217 51
95 % 232 268 53
90 % 232 268 57
70 % 232 268 68
50 % 232 268 93
40 % 232 268 114
30 % 232 268 126
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 228 259 43
95 % 228 259 59
90 % 228 259 63
70 % 228 259 75
50 % 228 259 98
40 % 228 259 120
30 % 228 259 131
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 205 233 48
95 % 205 233 66
90 % 205 233 71
70 % 205 233 82
50 % 225 306 83
40 % 225 306 102
30 % 225 306 114
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 262 42
95 % 233 270 45
90 % 233 270 51
70 % 233 270 60
50 % 275 396 32
40 % 275 399 43
30 % 275 399 61
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 233 269 36
95 % 233 269 49
90 % 233 269 53
70 % 233 269 63
50 % 276 400 31
40 % 276 400 44
30 % 276 402 59
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 235 274 27
95 % 241 280 37
90 % 241 280 41
70 % 241 280 52
50 % 241 280 87
40 % 241 280 106
30 % 265 336 93
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 273 28
95 % 234 274 41
90 % 234 274 45
70 % 234 274 56
50 % 262 339 71
40 % 262 342 84
30 % 262 342 97
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 21925
95 % 4 4 18857
90 % 234 273 46
70 % 234 273 57
50 % 278 401 28
40 % 279 405 38
30 % 312 514 30
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 74 91 212
95 % 232 269 51
90 % 232 269 55
70 % 232 269 65
50 % 274 395 35
40 % 274 395 47
30 % 305 501 35

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.