Sequence Similarity Clusters for the Entities in PDB 1I95

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 233 269 39
95 % 234 270 53
90 % 234 270 58
70 % 234 270 68
50 % 283 421 26
40 % 283 421 38
30 % 316 528 32
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 271 35
95 % 234 271 49
90 % 234 271 54
70 % 234 271 64
50 % 276 415 32
40 % 311 537 19
30 % 311 537 31
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 173 217 51
95 % 234 278 39
90 % 234 278 44
70 % 276 422 19
50 % 276 432 24
40 % 276 432 35
30 % 276 432 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 272 33
95 % 234 272 46
90 % 234 272 51
70 % 234 272 62
50 % 279 419 31
40 % 279 419 43
30 % 312 527 36
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 270 36
95 % 234 270 54
90 % 234 270 59
70 % 234 279 54
50 % 234 279 90
40 % 234 279 113
30 % 234 279 123
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 274 30
95 % 239 279 38
90 % 239 279 43
70 % 239 279 53
50 % 284 428 25
40 % 284 433 34
30 % 284 433 54
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 266 41
95 % 234 271 51
90 % 234 271 56
70 % 234 271 66
50 % 234 278 91
40 % 234 278 114
30 % 279 413 63
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 23548
95 % 4 4 20139
90 % 233 269 60
70 % 233 269 69
50 % 233 269 94
40 % 233 269 117
30 % 233 269 128
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 51 719
95 % 208 236 65
90 % 208 236 69
70 % 208 236 81
50 % 208 236 111
40 % 208 236 135
30 % 208 236 144
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 236 274 29
95 % 236 274 42
90 % 236 274 48
70 % 236 274 58
50 % 278 421 28
40 % 278 424 40
30 % 278 424 57
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 234 271 31
95 % 234 272 43
90 % 234 272 49
70 % 234 272 59
50 % 276 409 36
40 % 276 414 45
30 % 276 414 62
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 197 219 50
95 % 234 270 52
90 % 234 270 57
70 % 234 270 67
50 % 234 270 93
40 % 234 270 116
30 % 234 270 127
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 230 261 43
95 % 230 261 59
90 % 230 261 63
70 % 230 261 74
50 % 230 261 98
40 % 230 261 121
30 % 230 261 133
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 207 235 48
95 % 207 235 66
90 % 207 235 70
70 % 207 235 82
50 % 227 309 84
40 % 227 309 103
30 % 227 309 116
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 232 264 42
95 % 235 272 44
90 % 235 272 50
70 % 235 272 60
50 % 277 416 29
40 % 277 421 41
30 % 277 421 58
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 235 271 34
95 % 235 271 48
90 % 235 271 53
70 % 235 271 63
50 % 278 417 30
40 % 278 417 42
30 % 278 419 60
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 237 276 27
95 % 243 282 37
90 % 243 282 42
70 % 243 282 51
50 % 243 282 88
40 % 243 282 110
30 % 267 355 95
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 236 275 28
95 % 236 276 41
90 % 236 276 46
70 % 236 276 56
50 % 264 356 66
40 % 264 361 84
30 % 264 361 96
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 22693
95 % 4 4 19525
90 % 236 275 47
70 % 236 275 57
50 % 280 421 27
40 % 281 427 37
30 % 316 542 30
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 74 91 220
95 % 234 271 50
90 % 234 271 55
70 % 234 271 65
50 % 276 411 35
40 % 276 411 48
30 % 309 526 34

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.