Sequence Similarity Clusters for the Entities in PDB 1I94

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 267 37
95 % 118 268 52
90 % 118 268 55
70 % 118 268 67
50 % 149 397 25
40 % 149 397 36
30 % 165 496 31
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 269 35
95 % 118 269 48
90 % 118 269 51
70 % 118 269 62
50 % 143 391 33
40 % 161 493 18
30 % 161 493 33
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 73 217 48
95 % 118 276 37
90 % 118 276 41
70 % 143 404 20
50 % 143 409 23
40 % 143 409 33
30 % 143 409 55
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 270 33
95 % 118 270 45
90 % 118 270 49
70 % 118 270 59
50 % 146 396 31
40 % 146 396 44
30 % 162 497 34
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 268 36
95 % 118 268 53
90 % 118 268 56
70 % 118 270 60
50 % 118 270 89
40 % 118 270 111
30 % 118 270 123
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 272 29
95 % 122 277 36
90 % 122 277 40
70 % 122 277 51
50 % 150 404 24
40 % 150 407 34
30 % 150 407 56
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 264 38
95 % 118 269 50
90 % 118 269 53
70 % 118 269 64
50 % 118 271 88
40 % 118 271 109
30 % 146 392 64
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 22394
95 % 1 4 19130
90 % 118 267 57
70 % 118 267 68
50 % 118 267 93
40 % 118 267 114
30 % 118 267 127
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 51 684
95 % 106 234 62
90 % 106 234 66
70 % 106 234 78
50 % 106 234 107
40 % 106 234 132
30 % 106 234 141
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 119 272 28
95 % 119 272 41
90 % 119 272 46
70 % 119 272 56
50 % 144 396 27
40 % 144 399 38
30 % 144 399 57
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 269 31
95 % 118 270 42
90 % 118 270 47
70 % 118 270 57
50 % 143 390 32
40 % 143 393 43
30 % 143 393 61
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 106 217 49
95 % 118 268 51
90 % 118 268 54
70 % 118 268 66
50 % 118 268 91
40 % 118 268 112
30 % 118 268 124
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 259 42
95 % 118 259 57
90 % 118 259 61
70 % 118 259 73
50 % 118 259 96
40 % 118 259 119
30 % 118 259 130
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 233 45
95 % 105 233 63
90 % 105 233 67
70 % 105 233 79
50 % 109 304 81
40 % 109 304 100
30 % 109 304 113
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 117 262 39
95 % 118 270 43
90 % 118 270 48
70 % 118 270 58
50 % 143 392 30
40 % 143 395 41
30 % 143 395 60
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 118 269 34
95 % 118 269 47
90 % 118 269 50
70 % 118 269 61
50 % 144 396 29
40 % 144 396 42
30 % 144 398 59
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 274 26
95 % 126 280 34
90 % 126 280 39
70 % 126 280 50
50 % 126 280 86
40 % 126 280 105
30 % 149 334 90
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 119 273 27
95 % 119 274 39
90 % 119 274 43
70 % 119 274 54
50 % 144 338 68
40 % 144 341 78
30 % 144 341 91
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 21574
95 % 1 4 18550
90 % 119 273 44
70 % 119 273 55
50 % 146 397 26
40 % 147 401 35
30 % 165 506 29
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 91 207
95 % 118 269 49
90 % 118 269 52
70 % 118 269 63
50 % 143 391 34
40 % 143 391 45
30 % 159 494 35

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.