Sequence Similarity Clusters for the Entities in PDB 1I94

Entity #1 | Chains: A
16S RRNA rna, length: 1514 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
30S RIBOSOMAL PROTEIN S10 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 237 25
95 % 105 238 38
90 % 105 238 43
70 % 105 238 53
50 % 129 330 30
40 % 129 330 40
30 % 143 396 41
Entity #11 | Chains: K
30S RIBOSOMAL PROTEIN S11 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 239 23
95 % 105 239 34
90 % 105 239 39
70 % 105 239 48
50 % 123 324 38
40 % 139 397 27
30 % 139 398 39
Entity #12 | Chains: L
30S RIBOSOMAL PROTEIN S12 protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 194 42
95 % 105 246 22
90 % 105 246 27
70 % 123 335 23
50 % 123 336 29
40 % 123 336 39
30 % 123 336 56
Entity #13 | Chains: M
30S RIBOSOMAL PROTEIN S13 protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 240 20
95 % 105 240 32
90 % 105 240 37
70 % 105 240 46
50 % 126 329 35
40 % 126 329 46
30 % 140 397 46
Entity #14 | Chains: N
30S RIBOSOMAL PROTEIN S14 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 238 24
95 % 105 238 39
90 % 105 238 44
70 % 105 239 51
50 % 105 239 82
40 % 105 239 107
30 % 105 239 123
Entity #15 | Chains: O
30S RIBOSOMAL PROTEIN S15 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 242 16
95 % 109 247 21
90 % 109 247 26
70 % 109 247 37
50 % 130 337 27
40 % 130 338 38
30 % 130 338 54
Entity #16 | Chains: P
30S RIBOSOMAL PROTEIN S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 234 26
95 % 105 239 36
90 % 105 239 41
70 % 105 239 50
50 % 105 239 81
40 % 105 240 106
30 % 126 327 64
Entity #17 | Chains: Q
30S RIBOSOMAL PROTEIN S17 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 20114
95 % 1 4 17311
90 % 105 237 45
70 % 105 237 54
50 % 105 237 87
40 % 105 237 113
30 % 105 237 128
Entity #18 | Chains: R
30S RIBOSOMAL PROTEIN S18 protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 49 564
95 % 94 205 63
90 % 94 205 66
70 % 94 205 75
50 % 94 205 109
40 % 94 205 129
30 % 94 205 145
Entity #19 | Chains: S
30S RIBOSOMAL PROTEIN S19 protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 106 242 15
95 % 106 242 26
90 % 106 242 31
70 % 106 242 42
50 % 124 327 34
40 % 124 327 44
30 % 124 327 60
Entity #2 | Chains: B
30S RIBOSOMAL PROTEIN S2 protein, length: 255 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 239 17
95 % 105 240 27
90 % 105 240 33
70 % 105 240 43
50 % 123 323 37
40 % 123 324 47
30 % 123 324 63
Entity #20 | Chains: T
30S RIBOSOMAL PROTEIN S20 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 93 188 48
95 % 105 238 37
90 % 105 238 42
70 % 105 238 52
50 % 105 238 83
40 % 105 238 109
30 % 105 238 125
Entity #21 | Chains: U
30S RIBOSOMAL PROTEIN THX protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 229 39
95 % 105 229 54
90 % 105 229 58
70 % 105 229 69
50 % 105 229 96
40 % 105 229 118
30 % 105 229 132
Entity #3 | Chains: C
30S RIBOSOMAL PROTEIN S3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 93 204 43
95 % 93 204 64
90 % 93 204 67
70 % 93 204 76
50 % 97 252 68
40 % 97 252 93
30 % 97 252 110
Entity #4 | Chains: D
30S RIBOSOMAL PROTEIN S4 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 104 232 27
95 % 105 240 28
90 % 105 240 34
70 % 105 240 44
50 % 123 324 36
40 % 123 325 45
30 % 123 325 62
Entity #5 | Chains: E
30S RIBOSOMAL PROTEIN S5 protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 239 22
95 % 105 239 33
90 % 105 239 38
70 % 105 239 47
50 % 124 328 33
40 % 124 328 43
30 % 124 330 59
Entity #6 | Chains: F
30S RIBOSOMAL PROTEIN S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 107 244 13
95 % 113 250 20
90 % 113 250 25
70 % 113 250 35
50 % 113 250 70
40 % 113 250 94
30 % 129 289 80
Entity #7 | Chains: G
30S RIBOSOMAL PROTEIN S7 protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 106 243 14
95 % 106 244 25
90 % 106 244 29
70 % 106 244 40
50 % 124 289 50
40 % 124 290 62
30 % 124 290 83
Entity #8 | Chains: H
30S RIBOSOMAL PROTEIN S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 19345
95 % 1 4 16760
90 % 106 243 30
70 % 106 243 41
50 % 126 330 31
40 % 127 332 41
30 % 142 401 37
Entity #9 | Chains: I
30S RIBOSOMAL PROTEIN S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 90 190
95 % 105 239 35
90 % 105 239 40
70 % 105 239 49
50 % 123 324 39
40 % 123 324 49
30 % 137 392 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.