Sequence Similarity Clusters for the Entities in PDB 1I7T

Entity #1 | Chains: A,D
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 185 204 53
95 % 233 255 59 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 283 308 35
70 % 659 727 6
50 % 661 732 6
40 % 703 783 10
30 % 790 909 15
Entity #2 | Chains: B,E
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 558 624 2
95 % 599 668 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 608 677 4
70 % 812 924 4
50 % 827 946 3
40 % 827 946 7
30 % 827 946 12
Entity #3 | Chains: C,F
9 RESIDUE PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures