Sequence Similarity Clusters for the Entities in PDB 1I7T

Entity #1 | Chains: A,D
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 185 204 53
95 % 233 255 60 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 283 309 36
70 % 667 736 6
50 % 678 750 6
40 % 711 792 10
30 % 800 923 15
Entity #2 | Chains: B,E
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 566 634 2
95 % 607 678 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 1.0
PDBFlex
90 % 616 687 4
70 % 824 940 4
50 % 839 962 3
40 % 839 962 7
30 % 839 962 12
Entity #3 | Chains: C,F
9 RESIDUE PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures