Sequence Similarity Clusters for the Entities in PDB 1I7M

Entity #1 | Chains: B,D
S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 23 2112
95 % 21 23 2422 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 21 23 2498
70 % 21 23 2502
50 % 21 23 2476
40 % 21 23 2428
30 % 21 23 2279
Entity #2 | Chains: A,C
S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 11 5106
95 % 21 23 2423 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 21 23 2499
70 % 21 23 2503
50 % 21 23 2477
40 % 21 23 2429
30 % 22 24 2204

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures