Sequence Similarity Clusters for the Entities in PDB 1I7M

Entity #1 | Chains: B,D
S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 23 1731
95 % 21 23 2287 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 21 23 2350
70 % 21 23 2336
50 % 21 23 2326
40 % 21 23 2311
30 % 21 23 2218
Entity #2 | Chains: A,C
S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 12072
95 % 21 23 2244 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 21 23 2309
70 % 21 23 2306
50 % 21 23 2287
40 % 21 23 2275
30 % 21 23 2186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.