Sequence Similarity Clusters for the Entities in PDB 1I79

Entity #1 | Chains: B
S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 23 1869
95 % 14 23 2444 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 14 23 2508
70 % 14 23 2500
50 % 14 23 2489
40 % 14 23 2459
30 % 14 23 2342
Entity #2 | Chains: A
S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12761
95 % 14 23 2394 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 14 23 2458
70 % 14 23 2461
50 % 14 23 2443
40 % 14 23 2417
30 % 14 23 2305

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures