Sequence Similarity Clusters for the Entities in PDB 1I79

Entity #1 | Chains: B
S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 23 1898
95 % 14 23 2478 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 14 23 2539
70 % 14 23 2532
50 % 14 23 2518
40 % 14 23 2481
30 % 14 23 2365
Entity #2 | Chains: A
S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12956
95 % 14 23 2431 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 14 23 2494
70 % 14 23 2500
50 % 14 23 2477
40 % 14 23 2443
30 % 14 23 2332

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures