Sequence Similarity Clusters for the Entities in PDB 1I72

Entity #1 | Chains: B
S-ADENOSYLMETHIONINE DECARBOXYLASE BETA CHAIN protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 23 1821
95 % 11 23 2388
90 % 11 23 2453
70 % 11 23 2440
50 % 11 23 2430
40 % 11 23 2410
30 % 11 23 2299
Entity #2 | Chains: A
S-ADENOSYLMETHIONINE DECARBOXYLASE ALPHA CHAIN protein, length: 267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 12527
95 % 11 23 2340 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.6
PDBFlex
90 % 11 23 2405
70 % 11 23 2401
50 % 11 23 2381
40 % 11 23 2366
30 % 11 23 2261

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures