Sequence Similarity Clusters for the Entities in PDB 1I6V

Entity #1 | Chains: A,B
DNA-DIRECTED RNA POLYMERASE protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35577
95 % 4 13 1379
90 % 4 13 1398
70 % 40 57 200
50 % 40 57 241
40 % 47 92 153
30 % 48 93 167
Entity #2 | Chains: C
DNA-DIRECTED RNA POLYMERASE protein, length: 1118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49099
95 % 4 13 3175
90 % 40 57 449
70 % 40 57 486
50 % 52 71 487
40 % 52 71 521
30 % 52 71 521
Entity #3 | Chains: D
DNA-DIRECTED RNA POLYMERASE protein, length: 1264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49061
95 % 1 2 24840
90 % 1 2 24030
70 % 1 2 21897
50 % 1 2 18985
40 % 1 2 16919
30 % 1 2 14533
Entity #4 | Chains: E
DNA-DIRECTED RNA POLYMERASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 12 2875
95 % 4 12 3576
90 % 40 56 469
70 % 40 56 507
50 % 40 56 569
40 % 40 56 606
30 % 40 56 597

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.