Sequence Similarity Clusters for the Entities in PDB 1I6V

Entity #1 | Chains: A,B
DNA-DIRECTED RNA POLYMERASE protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33974
95 % 3 12 1399
90 % 3 12 1424
70 % 35 52 217
50 % 35 52 249
40 % 41 79 171
30 % 42 80 187
Entity #2 | Chains: C
DNA-DIRECTED RNA POLYMERASE protein, length: 1118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47002
95 % 3 12 3166
90 % 35 52 474
70 % 35 52 510
50 % 36 53 560
40 % 36 53 605
30 % 36 53 601
Entity #3 | Chains: D
DNA-DIRECTED RNA POLYMERASE protein, length: 1264 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46963
95 % 1 2 23696
90 % 1 2 22938
70 % 1 2 20994
50 % 1 2 18266
40 % 1 2 16285
30 % 1 2 14000
Entity #4 | Chains: E
DNA-DIRECTED RNA POLYMERASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 11 2872
95 % 3 11 3606
90 % 35 51 491
70 % 35 51 532
50 % 35 51 585
40 % 35 51 616
30 % 35 51 619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.