Sequence Similarity Clusters for the Entities in PDB 1I6J

Entity #1 | Chains: B
5'-D(*GP*TP*CP*GP*TP*C)-3' dna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
5'-D(*AP*CP*GP*GP*GP*AP*CP*GP*AP*C)-3' dna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
REVERSE TRANSCRIPTASE protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 26 1360
95 % 12 27 1766
90 % 12 27 1807
70 % 12 27 1839
50 % 12 27 1856
40 % 12 27 1862
30 % 12 27 1792

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.