Sequence Similarity Clusters for the Entities in PDB 1I6C

Entity #1 | Chains: A
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 10 7109
95 % 10 10 7248
90 % 20 20 3487
70 % 20 20 3305
50 % 58 59 1004
40 % 75 77 747
30 % 82 84 675

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4N7F 1 A, B E3 ubiquitin-protein ligase NEDD4 WW3 domain (UNP residues 841-874) 9606 2.3.2.26 | Details
2 5VTJ 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 WW domain sequence 1 (UNP residues 6-39) 9606 5.2.1.8 | Details
3 4N7H 1 A E3 ubiquitin-protein ligase NEDD4 3rd WW domain (UNP residues 840-872) 9606 2.3.2.26 | Details
4 5VTK 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 WW domain sequence 1 (UNP residues 6-39) 9606 5.2.1.8 | Details
5 5VTI 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 WW domain sequence 3 (UNP residues 6-39) 9606 5.2.1.8 | Details
6 4GWT 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 WW domain from Pin1, (6-39) 9606 5.2.1.8 | Details
7 4GWV 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 WW domain from Pin1, (6-39) 9606 5.2.1.8 | Details
8 2NC3 1 A Pin1 WW Domain 9606
9 2NC4 1 A Pin1 WW Domain 9606
10 2NC5 1 A Pin1 WW Domain 9606
11 2NC6 1 A Pin1 WW Domain 9606
12 2N8S 1 A E3 ubiquitin-protein ligase NEDD4 WW1 Domain 10116 2.3.2.26 | Details
13 2N8T 1 A E3 ubiquitin-protein ligase NEDD4 WW2 Domain 10116 2.3.2.26 | Details
14 2N8U 1 A E3 ubiquitin-protein ligase NEDD4 WW2 Domain 10116 2.3.2.26 | Details
15 2N4R 1 A Transcription elongation regulator 1 9606
16 2N4S 1 A Transcription elongation regulator 1 9606
17 2N4T 1 A Transcription elongation regulator 1 9606
18 2N4U 1 A Transcription elongation regulator 1 9606
19 2N4V 1 A Transcription elongation regulator 1 9606
20 2N4W 1 A Transcription elongation regulator 1 9606
21 2N1O 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 UNP residues 7-39 9606 5.2.1.8 | Details
22 5AHT 1 A E3 UBIQUITIN-PROTEIN LIGASE NEDD4 WW3, UNP RESIDUES 838-877 9606 2.3.2.26 | Details
23 2MW9 1 A Transcription elongation regulator 1 WW 2 domain residues 428-464 9606
24 2MWA 1 A Transcription elongation regulator 1 WW 2 domain residues 430-466 9606
25 2MWB 1 A Transcription elongation regulator 1 WW 2 domain residues 430-466 9606
26 2MPT 1 A E3 ubiquitin-protein ligase NEDD4-like WW3 domain, UNP RESIDUES 496-539 9606 2.3.2.26 | Details
27 2MDW 1 A, B Designed protein 32630
28 2M9I 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 MODIFIED WW DOMAIN (UNP RESIDUES 6-39) 9606 5.2.1.8 | Details
29 2M9J 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 MODIFIED WW DOMAIN (UNP RESIDUES 6-39) 9606 5.2.1.8 | Details
30 2M9E 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 modified WW domain (UNP residues 6-39, see remark 999) 9606 5.2.1.8 | Details
31 2M9F 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 modified WW domain (UNP residues 6-39, see remark 999) 9606 5.2.1.8 | Details
32 2M3O 1 W E3 ubiquitin-protein ligase NEDD4 third WW domain 9606 2.3.2.26 | Details
33 2LTV 1 A Yorkie homolog WW2 domain (UNP residues 230-265) 9606
34 2LTW 1 A Yorkie homolog WW1 domain (UNP residues 170-205) 9606
35 2LTX 1 A E3 ubiquitin-protein ligase SMURF1 WW2 domain (UNP residues 306-340) 9606 2.3.2.26 | Details
36 2LTY 1 A E3 ubiquitin-protein ligase NEDD4-like WW2 domain (UNP residues 385-417) 9606 2.3.2.26 | Details
37 2LTZ 1 A E3 ubiquitin-protein ligase SMURF2 WW3 domain (UNP residues 297-333) 9606 2.3.2.26 | Details
38 2LAW 1 A Yorkie homolog second WW domain, residues 230-263 9606
39 2LAX 1 A Yorkie homolog first WW domain, residues 170-205 9606
40 2LAY 1 A Yorkie homolog residues 170-205 9606
41 2LAZ 1 A E3 ubiquitin-protein ligase SMURF1 residues 235-267 9606 2.3.2.26 | Details
42 2LB0 1 A E3 ubiquitin-protein ligase SMURF1 residues 235-267 9606 2.3.2.26 | Details
43 2LB1 1 A E3 ubiquitin-protein ligase SMURF1 residues 305-339 9606 2.3.2.26 | Details
44 2LB2 1 A E3 ubiquitin-protein ligase NEDD4-like residues 386-420 9606 2.3.2.26 | Details
45 2LB3 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 residues 6-41 9606 5.2.1.8 | Details
46 2LAJ 1 A E3 ubiquitin-protein ligase NEDD4-like WW 3 domain residues 496-535 9606 2.3.2.26 | Details
47 2KYK 1 A E3 ubiquitin-protein ligase Itchy homolog WW 2 domain 9606 2.3.2.26 | Details
48 2KCF 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 9606 5.2.1.8 | Details
49 2KBU 1 A Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 residues RSSG replaced by the beta-turn mimic CFD UNP residues 6-39 9606 5.2.1.8 | Details
50 2RM0 1 W Transcription elongation regulator 1 WW 2 domain, sequence database residues 430-466 10090
51 2RLY 1 W Transcription elongation regulator 1 WW 2 domain, sequence database residues 430-466 10090
52 2JUP 1 W Transcription elongation regulator 1 WW 2 domain, sequence database residues 430-466 10090
53 2YSC 1 A Amyloid beta A4 precursor protein-binding family B member 3 WW domain 9606
54 2YSF 1 A E3 ubiquitin-protein ligase Itchy homolog WW domain, UNP residues 480-512 9606 2.3.2.26 | Details
55 2YSG 1 A Syntaxin-binding protein 4 WW domain, UNP residues 498-530 9606
56 2YSH 1 A Growth-arrest-specific protein 7 WW domain, UNP residues 15-47 9606
57 2YSI 1 A Transcription elongation regulator 1 WW domain 10090
58 2JOC 1 A Itchy E3 ubiquitin protein ligase WW 3 domain, sequence database residues 399-432 10090 2.3.2.26 | Details
59 2JO9 1 A Itchy E3 ubiquitin protein ligase WW 3 DOMAIN, SEQUENCE DATABASE RESIDUES 399-432 10090 2.3.2.26 | Details
60 2OP7 1 A NEDD4-like E3 ubiquitin-protein ligase WWP1 residues 494-532 9606 2.3.2.26 | Details
61 2JMF 1 A E3 ubiquitin-protein ligase suppressor of deltex WW4 domain, residues 515-557 7227 2.3.2.26 | Details
62 2NNT 1 A, B, C, D Transcription elongation regulator 1 second WW domain 9606
63 2DJY 1 A Smad ubiquitination regulatory factor 2 WW3 domain 9606 2.3.2.26 | Details
64 2EZ5 1 W E3 ubiquitin-protein ligase NEDD4 WW3* domain 7227 6.3.2 | Details
65 1YMZ 1 A CC45
66 1YIU 1 A Itchy E3 ubiquitin protein ligase WW3 10090 2.3.2.26 | Details
67 1WR7 1 A Nedd4-2 third WW domain 10090 2.3.2.26 | Details
68 1WR3 1 A ubiquitin-protein ligase Nedd4-2 first WW domain 10090 2.3.2.26 | Details
69 1WR4 1 A ubiquitin-protein ligase Nedd4-2 second WW domain 10090 2.3.2.26 | Details
70 1K9Q 1 A 65 kDa Yes-associated protein Wild type WW domain 9606
71 1K9R 1 A 65 kDa Yes-associated protein Wild type WW domain 9606
72 1K5R 1 A 65 KDA YES-ASSOCIATED PROTEIN 40-peptide construct with synthetic Amino-ethyl-sulfanyl-acetic acid link at position 24 WW domain, residues 5-44 9606
73 1I8G 2 B PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 WW DOMAIN (RESIDUES 6-44) 9606 5.2.1.8 | Details
74 1I8H 2 B PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 WW DOMAIN (RESIDUES 6-44) 9606 5.2.1.8 | Details
75 1I6C 1 A PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1 WW DOMAIN (RESIDUES 6-44) 9606 5.2.1.8 | Details
76 1E0M 1 A WWPROTOTYPE DOMAIN 32630
77 1E0L 1 A FORMIN BINDING PROTEIN DOMAIN 10090