Sequence Similarity Clusters for the Entities in PDB 1I5Y

Entity #1 | Chains: A
TRANSMEMBRANE GLYCOPROTEIN (GP41) protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73151
95 % 8 13 3703 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.6
PDBFlex
90 % 8 13 3753
70 % 9 17 1717
50 % 9 17 1752
40 % 9 17 1756
30 % 9 17 1713

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures