1I5K

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN


Sequence Similarity Clusters for the Entities in PDB 1I5K

Entity #1 | Chains: A,B
PLASMINOGEN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30759
95 % 1 3 21346 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 20726
70 % 1 3 19021
50 % 19 25 1988
40 % 21 31 1441
30 % 21 31 1425
Entity #2 | Chains: C,D
M PROTEIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16850
95 % 2 4 14046 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 4 13816
70 % 2 4 12963
50 % 2 4 11558
40 % 2 4 10475
30 % 2 4 9139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures