1I5K

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN


Sequence Similarity Clusters for the Entities in PDB 1I5K

Entity #1 | Chains: A,B
PLASMINOGEN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28581
95 % 1 3 19826 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 19282
70 % 1 3 17784
50 % 19 25 1824
40 % 21 31 1362
30 % 21 31 1342
Entity #2 | Chains: C,D
M PROTEIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15555
95 % 2 4 13036 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 4 12827
70 % 2 4 12038
50 % 2 4 10772
40 % 2 4 9780
30 % 2 4 8517

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.