1I5K

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN


Sequence Similarity Clusters for the Entities in PDB 1I5K

Entity #1 | Chains: A,B
PLASMINOGEN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25782
95 % 1 3 20244 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 19664
70 % 1 3 18051
50 % 19 25 2006
40 % 23 34 1190
30 % 23 34 1187
Entity #2 | Chains: C,D
M PROTEIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16647
95 % 2 4 13419 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 4 13192
70 % 2 4 12380
50 % 2 4 11018
40 % 2 4 9916
30 % 2 4 8471

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures