1I5K

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN


Sequence Similarity Clusters for the Entities in PDB 1I5K

Entity #1 | Chains: A,B
PLASMINOGEN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29712
95 % 1 3 20620 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 3 20050
70 % 1 3 18396
50 % 19 25 1900
40 % 21 31 1397
30 % 21 31 1377
Entity #2 | Chains: C,D
M PROTEIN protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16194
95 % 2 4 13554 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 4 13336
70 % 2 4 12530
50 % 2 4 11179
40 % 2 4 10146
30 % 2 4 8853

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.