Sequence Similarity Clusters for the Entities in PDB 1I51

Entity #1 | Chains: A,C
CASPASE-7 SUBUNIT P20 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44782
95 % 1 1 33762 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 32262
70 % 1 1 28763
50 % 36 41 1008
40 % 41 48 779
30 % 41 48 767
Entity #2 | Chains: B,D
CASPASE-7 SUBUNIT P11 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 14 1686
95 % 16 21 1315 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 16 21 1338
70 % 16 21 1356
50 % 53 66 451
40 % 53 67 483
30 % 66 83 341
Entity #3 | Chains: E,F
X-LINKED INHIBITOR OF APOPTOSIS PROTEIN protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23899
95 % 1 4 10898
90 % 1 4 10747
70 % 1 4 10206
50 % 1 4 9242
40 % 1 4 8453
30 % 1 4 7445

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures