Sequence Similarity Clusters for the Entities in PDB 1I51

Entity #1 | Chains: A,C
CASPASE-7 SUBUNIT P20 protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41250
95 % 1 1 34701 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 33179
70 % 1 1 29594
50 % 36 41 1023
40 % 41 48 795
30 % 41 48 794
Entity #2 | Chains: B,D
CASPASE-7 SUBUNIT P11 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 17 1497
95 % 16 21 1357 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 16 21 1377
70 % 16 21 1402
50 % 67 80 405
40 % 67 81 428
30 % 80 97 317
Entity #3 | Chains: E,F
X-LINKED INHIBITOR OF APOPTOSIS PROTEIN protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 16580
95 % 1 4 11194
90 % 1 4 11046
70 % 1 4 10433
50 % 1 4 9399
40 % 1 4 8510
30 % 1 4 7358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures