Sequence Similarity Clusters for the Entities in PDB 1I4O

Entity #1 | Chains: A,B
CASPASE-7 protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12220
95 % 4 18 1493 Flexibility: Low
Max RMSD: 7.2, Avg RMSD: 2.0
PDBFlex
90 % 4 18 1525
70 % 4 18 1529
50 % 57 77 405
40 % 71 100 245
30 % 75 112 220
Entity #2 | Chains: C,D
BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4 protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44567
95 % 1 1 33533
90 % 1 1 32066
70 % 1 1 28606
50 % 1 1 24410
40 % 1 1 21481
30 % 1 1 18193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.