Sequence Similarity Clusters for the Entities in PDB 1I4E

Entity #1 | Chains: A
Early 35 kDa protein protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12253
95 % 3 5 6875 Flexibility: Medium
Max RMSD: 7.1, Avg RMSD: 3.4
PDBFlex
90 % 3 5 6856
70 % 3 5 6695
50 % 3 5 6209
40 % 3 5 5811
30 % 3 5 5202
Entity #2 | Chains: B
Caspase-8 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27044
95 % 5 7 6347
90 % 5 7 6332
70 % 5 7 6183
50 % 5 7 5787
40 % 5 7 5416
30 % 107 112 220

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.