Sequence Similarity Clusters for the Entities in PDB 1I4D

Entity #1 | Chains: A,B
ARFAPTIN 2 protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 8678
95 % 1 4 8698 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 1 4 8622
70 % 1 4 8311
50 % 1 4 7616
40 % 1 4 6995
30 % 1 4 6116
Entity #2 | Chains: D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 1816
95 % 26 40 629 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 28 42 623
70 % 52 82 334
50 % 101 145 194
40 % 101 145 211
30 % 628 837 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures