Sequence Similarity Clusters for the Entities in PDB 1I4D

Entity #1 | Chains: A,B
ARFAPTIN 2 protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9031
95 % 1 4 9268 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 1 4 9174
70 % 1 4 8786
50 % 1 4 7957
40 % 1 4 7311
30 % 1 4 6447
Entity #2 | Chains: D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 13 1964
95 % 25 38 658 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 27 40 635
70 % 50 78 327
50 % 94 137 194
40 % 95 138 208
30 % 579 782 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.