Sequence Similarity Clusters for the Entities in PDB 1I4D

Entity #1 | Chains: A,B
ARFAPTIN 2 protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9217
95 % 1 4 9421 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 1 4 9326
70 % 1 4 8930
50 % 1 4 8092
40 % 1 4 7438
30 % 1 4 6558
Entity #2 | Chains: D
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 192 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 1616
95 % 26 40 618 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 28 42 616
70 % 52 82 324
50 % 99 143 192
40 % 100 144 203
30 % 609 817 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures