Sequence Similarity Clusters for the Entities in PDB 1I3O

Entity #1 | Chains: A,C
CASPASE 3 protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38598
95 % 2 2 11432
90 % 2 2 11252
70 % 2 2 10607
50 % 2 2 9520
40 % 2 2 8652
30 % 2 2 7569
Entity #2 | Chains: B,D
CASPASE 3 protein, length: 110 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 36 598
95 % 37 39 789
90 % 40 42 697
70 % 40 42 741
50 % 63 65 363
40 % 63 66 389
30 % 77 82 291
Entity #3 | Chains: E,F
BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26212
95 % 2 4 9645
90 % 2 4 9528
70 % 2 4 9043
50 % 2 4 8240
40 % 2 4 7573
30 % 2 4 6701

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.