Sequence Similarity Clusters for the Entities in PDB 1I3D

Entity #1 | Chains: A,B
HEMOGLOBIN GAMMA CHAINS protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 9285
95 % 1 5 5092 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 1 5 5120
70 % 60 346 14
50 % 142 754 4
40 % 143 759 7
30 % 435 1293 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures