Sequence Similarity Clusters for the Entities in PDB 1I2B

Entity #1 | Chains: A
SULFOLIPID BIOSYNTHESIS PROTEIN SQD1 protein, length: 404 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 24965
95 % 4 4 22212 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 4 4 21503
70 % 4 4 19636
50 % 4 4 16974
40 % 4 4 15018
30 % 4 4 12589

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures