Sequence Similarity Clusters for the Entities in PDB 1I1R

Entity #1 | Chains: A
INTERLEUKIN-6 RECEPTOR BETA CHAIN protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34974
95 % 1 2 30044 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 2 28812
70 % 1 2 25877
50 % 1 2 22170
40 % 1 2 19548
30 % 1 3 13408
Entity #2 | Chains: B
VIRAL IL-6 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66869
95 % 1 1 54184
90 % 1 1 51315
70 % 1 1 44817
50 % 1 1 38014
40 % 1 1 33253
30 % 1 1 27814

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures