Sequence Similarity Clusters for the Entities in PDB 1I1R

Entity #1 | Chains: A
INTERLEUKIN-6 RECEPTOR BETA CHAIN protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35697
95 % 1 2 27996 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 2 27041
70 % 1 2 24503
50 % 1 2 21063
40 % 1 2 18602
30 % 1 2 15832
Entity #2 | Chains: B
VIRAL IL-6 protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61238
95 % 1 1 42673
90 % 1 1 40552
70 % 1 1 35764
50 % 1 1 30509
40 % 1 1 26923
30 % 1 1 22827

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.