Sequence Similarity Clusters for the Entities in PDB 1I1A

Entity #1 | Chains: A
NEONATAL FC RECEPTOR A protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 14817
95 % 2 3 13975
90 % 2 3 13759
70 % 2 3 12965
50 % 5 12 2075
40 % 5 12 2073
30 % 734 868 15
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 7360
95 % 5 6 7922
90 % 5 6 7880
70 % 759 885 4
50 % 773 907 3
40 % 773 907 9
30 % 773 907 14
Entity #3 | Chains: C
IG GAMMA-2A CHAIN C REGION protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58865
95 % 1 3 17791
90 % 1 3 17418
70 % 2 4 13043
50 % 129 173 135
40 % 129 173 150
30 % 3787 5440 1
Entity #4 | Chains: D
IG GAMMA-2A CHAIN C REGION protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 26930
95 % 2 3 17791
90 % 2 3 17418
70 % 3 4 13043
50 % 130 173 135
40 % 130 173 150
30 % 3788 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.