Sequence Similarity Clusters for the Entities in PDB 1I1A

Entity #1 | Chains: A
NEONATAL FC RECEPTOR A protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 15051
95 % 2 3 14178
90 % 2 3 13954
70 % 2 3 13123
50 % 5 12 2101
40 % 5 12 2096
30 % 756 896 15
Entity #2 | Chains: B
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 7463
95 % 5 6 8037
90 % 5 6 7987
70 % 780 912 4
50 % 794 934 3
40 % 794 934 7
30 % 794 934 12
Entity #3 | Chains: C
IG GAMMA-2A CHAIN C REGION protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59630
95 % 1 3 18021 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 2.0
PDBFlex
90 % 1 3 17650
70 % 2 4 13202
50 % 135 179 136
40 % 135 179 150
30 % 3871 5567 1
Entity #4 | Chains: D
IG GAMMA-2A CHAIN C REGION protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 27284
95 % 2 3 18021 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 2.0
PDBFlex
90 % 2 3 17650
70 % 3 4 13202
50 % 136 179 136
40 % 136 179 150
30 % 3872 5567 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.