Sequence Similarity Clusters for the Entities in PDB 1I10

Entity #1 | Chains: A,B,C,D,E,F,G,H
L-LACTATE DEHYDROGENASE M CHAIN protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 18 308
95 % 11 18 448 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 31 41 157
70 % 35 52 165
50 % 35 52 192
40 % 119 160 64
30 % 158 219 38

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.