Sequence Similarity Clusters for the Entities in PDB 1I10

Entity #1 | Chains: A,B,C,D,E,F,G,H
L-LACTATE DEHYDROGENASE M CHAIN protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 23 302
95 % 16 23 387 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 36 46 158
70 % 41 58 160
50 % 41 58 195
40 % 125 167 73
30 % 170 232 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures