Sequence Similarity Clusters for the Entities in PDB 1HZZ

Entity #1 | Chains: A,B
PROTON-TRANSLOCATING NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT PNTAA protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 15 1137
95 % 11 15 1348 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.0
PDBFlex
90 % 11 15 1371
70 % 11 15 1401
50 % 12 16 1376
40 % 20 26 939
30 % 32 38 570
Entity #2 | Chains: C
PROTON-TRANSLOCATING NICOTINAMIDE NUCLEOTIDE TRANSHYDROGENASE SUBUNIT PNTB protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 9117
95 % 5 9 8018 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 9 7954
70 % 5 9 7670
50 % 5 9 7054
40 % 8 12 4058
30 % 8 12 3684

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures